Package: FuncDiv 1.0.0

FuncDiv: Compute Contributional Diversity Metrics

Compute alpha and beta contributional diversity metrics, which is intended for linking taxonomic and functional microbiome data. See 'GitHub' repository for the tutorial: <https://github.com/gavinmdouglas/FuncDiv/wiki>. Citation: Gavin M. Douglas, Sunu Kim, Morgan G. I. Langille, B. Jesse Shapiro (2023) <doi:10.1093/bioinformatics/btac809>.

Authors:Gavin Douglas [aut, cre]

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FuncDiv.pdf |FuncDiv.html✨
FuncDiv/json (API)

# Install 'FuncDiv' in R:
install.packages('FuncDiv', repos = c('https://gavinmdouglas.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/gavinmdouglas/funcdiv/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

3.70 score 10 stars 1 scripts 196 downloads 8 exports 11 dependencies

Last updated 2 years agofrom:8601891ecc. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 02 2024
R-4.5-win-x86_64OKNov 02 2024
R-4.5-linux-x86_64OKNov 02 2024
R-4.4-win-x86_64OKNov 02 2024
R-4.4-mac-x86_64OKNov 02 2024
R-4.4-mac-aarch64OKNov 02 2024
R-4.3-win-x86_64OKNov 02 2024
R-4.3-mac-x86_64OKNov 02 2024
R-4.3-mac-aarch64OKNov 02 2024

Exports:alpha_div_contribbeta_div_contribcompute_alpha_divcontrib_to_multitabfunc_abun_crossproductFuncDiv_alpha_metricsmultitab_to_contribsubset_func_and_abun_tables

Dependencies:apecollapsedata.tabledigestlatticenlmeparallelDistRcppRcppArmadilloRcppParallelRcppXPtrUtils